We're assessing the performance of 10x genomics software (CellRanger) to process single cell RNAseq data. Using a 64core 240G VM, it takes 7 hours to run our pipeline (down from 12 hours for 32 core, 120G VM), we're interested to know if the workspace we/re using can be whitelisted to look at reducing analysis time further by using bigger GCE instances.
Is it possible to have FireCloud workspace "regev-development/cellranger-test" whitelisted to be able to spin up GCE instances with skylake processors (the next step up from 64 core, 240G memory - it think they're 96 core, 360G RAM)?