Hello,
I am running a task on a sample set, and while it succeeds for some (often the majority), there are several samples that fail with the following message:
"OSError: [Errno 20] Not a directory: '/cromwell_root/oncotator_minimal-stdout.log'"
Why is it that a stdout is not produced, and what can I do to avoid this error? I know that for each sample there exists an input so I am not asking the method to operate on an entity that it would normally choke on. Thank you.
Best,
Matt Leventhal