We managed to analyze our own full genome data following the recommondations on GATK on Google Genomics. When we launch the analysis for a single sample, output is produced within 24 hours, with the recommended "best getting started experience" resource quota:
- Cores: 101 (minimum 17)
- Reserved Persistent Disk Space (GB): 10,500 (minimum 320)
- External In-Use IPs: 51 (minimum 2)
How would you recommend to extend these quota if we want to analyze multiple samples -say 100-
simultaneously, and still get results within 24 hours. It would be very helpful if you could provide us with a second point on the scale up curve based on your experience.